منابع مشابه
Persistence Length of DNA Macromolecule with Kinks
The study of configurational parameters of deformed DNA is a relevant problem in research of such important biological process as double helix compactization in cell. The deformations accompanied with local disruptions of the regular macromolecule structure cause significant bending of the double helix, or kinks. In this paper an approach for Kratky-Porod model to calculate persistence length o...
متن کاملEffects of kinks on DNA elasticity.
We study the elastic response of a wormlike polymer chain with reversible kinklike structural defects. This is a generic model for (a) the double-stranded DNA with sharp bends induced by binding of certain proteins, and (b) effects of trans-gauche rotations in the backbone of the single-stranded DNA. The problem is solved both analytically and numerically by generalizing the well-known analogy ...
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At age five a seemingly healthy boy inexplicably began to lose his hearing, which disappeared entirely before he turned 18. In the interim, he was diagnosed as hyperactive and suffered occasional seizures. By the time he was 23, his vision had declined; he had cataracts, glaucoma and progressive deterioration of the retina. Within five years he had experienced severe seizures, and his kidneys h...
متن کاملAtomistic simulations reveal bubbles, kinks and wrinkles in supercoiled DNA
Although DNA is frequently bent and supercoiled in the cell, much of the available information on DNA structure at the atomistic level is restricted to short linear sequences. We report atomistic molecular dynamics (MD) simulations of a series of DNA minicircles containing between 65 and 110 bp which we compare with a recent biochemical study of structural distortions in these tight DNA loops. ...
متن کاملSingle-molecule FRET measures bends and kinks in DNA.
We present advances in the use of single-molecule FRET measurements with flexibly linked dyes to derive full 3D structures of DNA constructs based on absolute distances. The resolution obtained by this single-molecule approach harbours the potential to study in detail also protein- or damage-induced DNA bending. If one is to generate a geometric structural model, distances between fixed positio...
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ژورنال
عنوان ژورنال: Structure
سال: 2006
ISSN: 0969-2126
DOI: 10.1016/j.str.2006.09.001